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Lab reportcohort · india-sim

10/30/2026, 1:54:18 PM · PharmCAT 3.4.0 · Research record, not medical advice

2
Genes standardised
2
Calls quoted
0
Coverage gaps
0
Identifiers removed
23.3s
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  1. Muse Sparkread 2 gene calls10.0s
  2. PharmCATstandardised 2 genes13.3s
  3. Rules0 coverage gaps

CallsMuse Spark each call quoted from the source, then standardised by PharmCAT

Sample Molecular Diagnostics, Bengaluru · NOT A REAL LAB · 27 Oct 2026 · open original photo

Uploaded lab report photo
GeneAs printedStandardisedPhenotype term
NUDT15“NUDT15 rs116855232 C/C Wild type”*1/*1Normal Metabolizer
TPMT“TPMT rs1142345 A/A Wild type; TPMT rs1800460 C/C Wild type”*1/*1Normal Metabolizer

Method as printed: Method: targeted genotyping by real-time PCR. Only the listed variants are assayed; variants outside this panel cannot be excluded. Genotypes are reported per rsID on the forward strand. Star-allele assignment is left to the treating clinician.

Coveragedeterministic rules · which India-relevant variants this panel named

NUDT15*3named on the report

Main NUDT15 risk allele, ~7-11% in Indians (PMID 29470173)

TPMT*3Cnamed on the report

Most common TPMT variant in South Asians

A variant the panel did not name is left out of cohort statistics for that variant, rather than counted as absent. Reader notes: Only the listed variants are assayed; variants outside this panel cannot be excluded. Star-allele assignment is left to the treating clinician. Synthetic document generated for software benchmarking. Not a real patient or laboratory.

Exportde-identified · the same record in three formats

Curator review

A curator checks each call against the source document before the record counts in a cohort, and Muse Spark web search finds published Indian frequency data for each variant. Both are written to the audit log. Reviewing is the one action that needs a curator code, because it is a claim that a person checked the page.

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Research tool, not medical advice. Pathya reads and standardises pharmacogenomic results; it makes no dose, drug or test recommendation. Audit log: data/cases/d2d3955718cf/audit.log.